13 Sea Cave Tours in Malta Worth the Trip

1.Comino & Gozo: Blue & Crystal Lagoons Cruise with Sea Caves

★★★★★★★★★★4.8 · 2,190 reviews · 3 - 4 hours · from $27Our pick

Join Sea Life Cruises from Ċirkewwa for a three to four hour boat trip with about 25 passengers. Captain Jose and his family team take you to Comino’s Blue and Crystal Lagoons, Gozo Harbour, Santa Maria Caves, and Elephant Rock, with time for swimming and snorkeling.

“Great young guide! He took us to best less busy spots on the route and gave us some history of the island. He works together with his sisters so it so nice to support a small family business. Cold drinks were available to purchase on board and the use of snorkelling masks and pool noodles were free of charge. I can highly recommend this tour with this company!!”

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2.Malta: Blue lagoon, Gozo, Comino & Crystal Lagoon Sea Caves

★★★★★★★★★★4.6 · 2,172 reviews · 4 - 5.5 hours · from $24Best value

Cruise from Marfa Jetty to Comino and Gozo for Blue Lagoon and Crystal Lagoon swims, coastal sights, a water slide, and a Gozo harbor visit. The English-speaking crew provides deck seating, shade, toilets, showers, and a cash bar. Optional cave trips cost €10.

“Really enjoyed the trip. The ship was confy and the Blue lagoon super warm to swim☀️ off course guide need to learn more thing to tell, not just “this is the hotel of island, they are renovating now”. And also we elephant rock and 2 more beaches in total 5min, so I would say to quick for 3 objects. About the Gozo island, so we just came to one shore, so also super short 😭 so more invested the trip would be even better 🤪”

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3.Malta: Comino, Santa Maria Bay, Blue Lagoon & Sea Caves Tour

★★★★★★★★★★4.7 · 825 reviews · 4 - 6.5 hours · from $35

Sail from Bugibba on the Seahorse, a white-and-brown gullet, with Captain Owen and his crew. Swim from the boat at Santa Maria Bay and Blue Lagoon, view Comino’s caves and rock formations, and use the onboard snack bar, toilet, shower, masks, and jump platform.

“Fantastic time onboard this boat. My husband and eldest daughter also did the speed boat to the caves, while myself and youngest daughter enjoyed some food on board and had a swim in the sea. Blue lagoon was very busy so we were glad to have a quiet area by the boat to swim. Totally recommend well worth the money and trip.”

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4.Comino Island: including Blue Lagoon, Crystal Lagoon & sea caves

★★★★★★★★★★4.5 · 723 reviews · 4 to 6 hours (approx.) · from $36

Cruise from Bugibba to Comino on a stable catamaran, stopping at the clear Crystal Lagoon, crowded Blue Lagoon, and Santa Maria caves. You get swimming time, slides, loungers, multilingual commentary, and onboard bars. Bring a towel, arrive early for the best seats, and expect extra charges for snorkel gear and lockers.

“Absolutely worth every penny. Views are incredible and plenty of time given at both lagoons to explore and swim. Food on offer is very reasonably-priced and delicious. Would definitely recommend again!”

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5.Comino: Blue Lagoon, Crystal Lagoon and Sea Caves Boat Tour

★★★★★★★★★★4.8 · 506 reviews · 3 - 4 hours · from $31

Join Captain Johnny and a small crew for a 3 to 4 hour Comino cruise from Ċirkewwa. Swim at Crystal Lagoon and Blue Lagoon, use the paddleboard and swim noodles, then see Santa Maria Bay, caves, Halfa Rock, and Elephant Rock from a boat carrying about 24 people.

“The four hour trip around Comino was lovely, despite some terrible weather. Johnny was a great guide and the smaller boat meant that we could get up close to the sea caves which was brilliant. A really enjoyable four hour trip and great value for money, thank you Johnny 😊”

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6.Malta: Blue Lagoon, Crystal Lagoon & Sea Caves Boat Tour

★★★★★★★★★★4.8 · 460 reviews · 3 - 4 hours · from $29

Join Johnny and a small crew for a 3 to 4-hour cruise from Cirkewwa around Comino. Swim at Crystal Lagoon and Blue Lagoon, visit Santa Maria Bay, pass Halfa Rock and San Niklaw, and get close to caves that larger boats cannot reach.

“My friend and I chose this trip because we wanted a smaller boat experience to the Blue Lagoon– and it turned out to be the perfect decision. The boat was rather small, and the group size was perfect! We visited beautiful spots and had plenty of time at each one. Johnny was super friendly and helpful, and there were pool noodles, a SUP and snorkeling gear available on board. All in all, a fantastic trip – we’d choose this one again in a heartbeat! 😊”

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7.Malta: Blue Lagoon & Sea Caves Boat Trip & Gozo Buggy Tour

★★★★★★★★★★4.3 · 342 reviews

This 6.5-hour outing combines a guided Gozo buggy tour with a schooner cruise past Comino’s Blue Lagoon, Crystal Lagoon, and sea caves. Drivers such as George, Sam, Mario, and Joe Vella have earned praise for making the island’s back roads lively and informative. Lunch, wine, water, and hotel pickup are included.

“Awesome trip, funny guide, tasty lunch and the boat ride to Comino was just an unforgettable experience. Recommended!”

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8.Malta: Comino Blue Lagoon Boat Tour, Sea Caves & Swim Stops

★★★★★★★★★★4.4 · 272 reviews · 5.5 hours · from $29

Set out from Bugibba on The Mermaid, a smaller red, blue, and white Maltese boat, for a 5.5-hour cruise to Comino. You get about three hours at the Blue Lagoon, cave viewing, swimming, snorkeling, a snack bar, and an English-speaking crew.

“We had the best time with mermaid cruises ! We did the Comino and blue cave tour in the afternoon / at sunset. The captain and crew were great ! I highly recommend this company and tour !”

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9.Malta: Comino, Blue Lagoon, + Sea Caves Day Trip

★★★★★★★★★★4.8 · 123 reviews · 4 - 6.5 hours · from $35

Sail Seahorse Cruises from Bugibba with Captain Owen and crew toward Comino, Gozo Harbor, Santa Maria Bay, and the Blue Lagoon. You get time for swimming and snorkeling, a boat platform, showers, masks with a deposit, and views of caves and rock formations. Evening trips skip Santa Maria Bay and Gozo Harbor.

“Fantastic day, our Captain Owen was amazing, very informative, definitely felt in safe hands with him and his very capable crew, we weren’t rushed at any point and felt we spent a good amount of time at all stops. Great value for money. I read a review by someone who went on two trips during their holiday and completely understand why. This is not a party boat, ideal for families. Would definitely recommend.”

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10.From Sliema: Blue Grotto Excursion & Sea Caves Boat Tour

★★★★★★★★★★4.3 · 62 reviews · 5 hours · from $41

Meet at McDonald’s in Sliema for a five-hour trip to Malta’s Blue Grotto. You’ll ride a local boat through glowing sea caves, enjoy coastal views near Xutu Tower, and have free time for swimming, lunch, or the village. An English-speaking team handles transport and coordination.

“Csodálatos! A napsütény hiányától eltekintve gyönyörű volt, a két túravezető nagyon vicces, segítőkészek,aranyosak és kedvesek voltak. Köszönjük nekik ezt a csodás élményt.”

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11.SerenityBoatChartersMalta: Bluelagoon,Comino,Gozo,&Sea Caves

★★★★★★★★★★5.0 · 53 reviews · 2 - 4 hours Top rated

Cruise privately from Cirkewwa or Mgarr with skipper George, exploring Blue Lagoon, Crystal Lagoon, Comino’s sea caves, cliffs, and Santa Marija Tower. Swim, snorkel, play your own music, and shape the route around your group for 2, 3, or 4 hours.

“Excellent trip, highly recommended. George was the perfect guide allowing us to manage our time at each stop and highlighting areas of interest. 5 stars!”

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12.Malta: Gozo, Comino and Blue Lagoon Cruise with Sea Caves

★★★★★★★★★★4.8 · 25 reviews · 6.5 hours · from $53

Sail the Seahorse from Bugibba at 10:30 AM, with Captain Owen and crew taking you past Malta’s coast to Victoria, Gozo, Comino’s Blue Lagoon, and Santa Maria caves. You get a swim platform, sundeck, toilets, showers, onboard food, and 1.5 hours at the lagoon.

“Le Seahorse est un beau voilier! Son Capitaine Owen est super accueillant avec son équipe ! Sourires, explications, musique, bar, nourriture, tout est là pour du confort ( tarifs boissons et nourriture très raisonnables). Bref une super journée sur un bateau à taille moyenne ce qui préserve une ambiance plus familiale ! Nous avons adorés! Ne vous restent qu'à embarquer!! 👌 Un petit clin d'œil de Nice !!”

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13.Malta: Blue lagoon and Gozo with Crystal Lagoon Sea Caves

★★★★★★★★★★4.3 · 23 reviews · 4 hours · from $35

Join an English-speaking skipper at Marfa Jetty for a four-hour boat trip to Comino and Gozo. You get a 90-minute Blue Lagoon stop, Crystal Lagoon views, cave passages, sunbeds, shade, a cash bar, and a water slide, with optional paid cave trips and Gozo transport.

“Activité très agréable mélangeant une partie en bateau et une partie découverte de Comino et de Gozo avec l'option payante de prendre un bus pour aller jusqu'à Victoria (5 euros par personne).”

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